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Solving solvents and solvates: structure determination using lab XRPD data and DFT optimisation

Julie Bardin 1Francesca P. Fabbiani 3Blair F. Johnston 1Kenneth Shankland 2Alastair J. Florence 1

1. University of Strathclyde, Strathclyde Institute for Pharmacy and Biomedical Sciences, 27 Taylor Street, Glasgow G40NR, United Kingdom
2. Rutherford Appleton Laboratory (RAL), Chilton, Didcot, Oxon OX11 0QX, United Kingdom
3. Universität Göttingen, GZG, Abteilung Kristallographie, Goldschmidtstr. 1, Gottingen D-37077, Germany

Abstract

Crystal structure determination using laboratory X-ray powder diffraction data in combination with global optimisation methods is a powerful approach for accessing structural details in the absence of single crystal samples.1 That said, the use of additional information to supplement the structure determination process can be of significant value, for example to reduce the conformational search space2 or confirm the location of hydrogen atoms.3  Here, we are concerned with determining the solid-state structures of a series of fluorinated ethanols with the aim of studying the molecular packing and hydrogen bonding interactions involving the solvent molecules in both pure solvent and in crystalline solvates.  We report the application of geometry optimisation using CASTEP to verify the location of hydrogen atoms in the structures obtained from the simulated annealing runs.  The optimised structures provide a more accurate description of the hydrogen bonding interactions in these materials.  Polycrystalline samples of the solvents were obtained by cooling a liquid sample held within a glass capillary in situ on a Bruker-AXS D8 powder diffractometer.  Despite rotating the capillaries during data collection, significant preferred orientation was encountered. Single crystal structures for two of the solvents studied were also obtained using high-P methods.

References

1. K. Shankland, W.I.F. David, L.B. McCusker, Ch. Baerlocher, ed., Structure Determination from Powder Diffraction Data, Oxford University Press Inc., New York, 2002.

2. I.J. Bruno, J.C. Cole, M. Kessler, Jie Luo, W.D.S. Motherwell, L.H. Purkis, B.R. Smith, R. Taylor, R. I. Cooper, S. E. Harris, A. G. Orpen, J. Chem. Inf. Comput. Sci., 44, 2133, 2004

3. C. Platteau, J. Lefebvre, F. Affouard, P. Derollez, Acta Crystallogr., B60, 453-460, 2004.

 

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Related papers

Presentation: Oral at 11th European Powder Diffraction Conference, Microsymposium 8, by Alastair J. Florence
See On-line Journal of 11th European Powder Diffraction Conference

Submitted: 2008-04-30 18:04
Revised:   2009-06-07 00:48